Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: spir FBgn0003475

.

Location

Chromosome 2L: 20,311,219-20,348,386 forward strand.

BDGP6.28:AE014134.6

About this gene

This gene has 10 transcripts (splice variants) and 88 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0339234	5598	586aa	FBpp0308341	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFB6	NM_001259173.1 NM_001299171.1 NP_001246102.1 NP_001286100.1
-	FBtr0081352	4881	1020aa	FBpp0080884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U1K1	NM_001259173.1 NM_001299171.1 NM_080115.3 NM_165323.3 NM_165324.2 NM_165325.3 NP_001246102.1 NP_001286100.1 NP_524854.2 NP_724254.1 NP_724255.1 NP_724256.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
-	FBtr0306556	4875	1018aa	FBpp0297511	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDT9	NM_001259172.2 NP_001246101.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0081353	4794	991aa	FBpp0080885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_080115.3 NP_524854.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0301884	4791	990aa	FBpp0291098	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHM3	NM_001169549.1 NP_001163020.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
-	FBtr0081355	3437	625aa	FBpp0080887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIQ1	NM_165325.3 NP_724256.2
-	FBtr0307893	2669	586aa	FBpp0300327	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NFB6	NM_001259173.1 NM_001299171.1 NP_001246102.1 NP_001286100.1
-	FBtr0081354	2666	585aa	FBpp0080886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4G7C9 D5AEN6	NM_165324.2 NP_724255.1
-	FBtr0339233	2212	498aa	FBpp0308340	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J709	NM_001299170.1 NP_001286099.1
-	FBtr0307894	2182	488aa	FBpp0300328	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH98 M9NCY7	NM_001259174.1 NP_001246103.1

.

Summary

.

.

Gene-based displays