Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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- Structural variants
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ID History
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DB built by FlyBase

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Gene: Sry-alpha FBgn0003510

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Description

Serendipity alpha

Gene Synonyms

Location

Primary_assembly 3R: 30,039,719-30,043,071 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 50 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Sry-alpha-RB	FBtr0346862	3300	530aa	FBpp0312402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GV23 P07666	NM_001316561 NM_001316561.1 NM_079841.3 NP_001303490 NP_001303490.1 NP_524580.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Sry-alpha-RA	FBtr0085557	1855	530aa	FBpp0084923	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GV23 P07666	NM_001316561.1 NM_079841 NM_079841.3 NP_001303490.1 NP_524580 NP_524580.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays