B52
Primary_assembly 3R: 13,661,311-13,666,891 forward strand.
BDGP6.32:AE014297.3
This gene has 10 transcripts (splice variants), 127 orthologues and 4 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| B52-RM | FBtr0308195 | 1590 | 355aa | FBpp0300515 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0C4DHG5 | NM_001014619.3 NM_176494 NM_176494.4 NP_001014619.2 NP_788671 NP_788671.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| B52-RK | FBtr0300588 | 3966 | 147aa | FBpp0289815 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001170133 NM_001170133.2 NM_176493.4 NP_001163604 NP_001163604.1 NP_788670.1 | - |
| B52-RF | FBtr0082804 | 3958 | 147aa | FBpp0082272 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001170133.2 NM_176493 NM_176493.4 NP_001163604.1 NP_788670 NP_788670.1 | - |
| B52-RI | FBtr0300586 | 3563 | 135aa | FBpp0289813 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001170132 NM_001170132.2 NM_176492.4 NP_001163603 NP_001163603.1 NP_788669.1 | - |
| B52-RD | FBtr0082803 | 3045 | 135aa | FBpp0082271 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_001170132.2 NM_176492 NM_176492.4 NP_001163603.1 NP_788669 NP_788669.1 | - |
| B52-RN | FBtr0308196 | 1725 | 350aa | FBpp0300516 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_176488.3 NM_176489.3 NM_176490 NM_176490.3 NP_788665.1 NP_788666.1 NP_788667 NP_788667.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| B52-RB | FBtr0082802 | 1643 | 329aa | FBpp0082270 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_176491 NM_176491.3 NP_788668 NP_788668.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| B52-RO | FBtr0308197 | 1580 | 355aa | FBpp0300517 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0C4DHG5 | NM_001014619 NM_001014619.3 NM_176494.4 NP_001014619 NP_001014619.2 NP_788671.2 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| B52-RA | FBtr0082801 | 1565 | 350aa | FBpp0082269 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_176488 NM_176488.3 NM_176489.3 NM_176490.3 NP_788665 NP_788665.1 NP_788666.1 NP_788667.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| B52-RC | FBtr0082806 | 1557 | 350aa | FBpp0082274 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | P26686 | NM_176488.3 NM_176489 NM_176489.3 NM_176490.3 NP_788665.1 NP_788666 NP_788666.1 NP_788667.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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