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DB built by FlyBase

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Gene: pros FBgn0004595

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Description

prospero

Gene Synonyms

Location

Primary_assembly 3R: 11,328,480-11,407,627 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 6 transcripts (splice variants) and 144 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
pros-RI	FBtr0304604	23486	1835aa	FBpp0293146	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K630	NM_001260116 NM_001260116.2 NP_001247045 NP_001247045.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
pros-RM	FBtr0304608	22289	1703aa	FBpp0293150	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P29617	NM_001260117 NM_001260117.2 NM_079593.6 NM_169386.3 NM_176459.4 NP_001247046 NP_001247046.1 NP_524317.4 NP_731565.4 NP_788636.3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pros-RH	FBtr0304603	22169	1674aa	FBpp0293145	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6Q6	NM_001260115 NM_001260115.2 NP_001247044 NP_001247044.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pros-RK	FBtr0304606	7890	1535aa	FBpp0293148	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_169386 NM_169386.3 NP_731565 NP_731565.4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pros-RJ	FBtr0304605	5613	1403aa	FBpp0293147	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_079593 NM_079593.6 NP_524317 NP_524317.4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
pros-RL	FBtr0304607	5526	1374aa	FBpp0293149	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_176459 NM_176459.4 NP_788636 NP_788636.3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays