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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Structural variants
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DB built by FlyBase

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Gene: rho FBgn0004635

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Description

rhomboid

Gene Synonyms

Location

Primary_assembly 3L: 1,463,811-1,468,944 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 12 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
rho-RB	FBtr0333207	3000	355aa	FBpp0305409	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P20350 Q540V7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
rho-RA	FBtr0072694	2531	355aa	FBpp0072578	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P20350 Q540V7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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