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DB built by FlyBase

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Gene: HmgZ FBgn0010228

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Description

HMG protein Z

Gene Synonyms

Location

Primary_assembly 2R: 21,697,488-21,707,861 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 89 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HmgZ-RC	FBtr0342960	1188	111aa	FBpp0309731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG36 Q06943	NM_001299765 NM_001299765.1 NM_001299766.1 NM_166476.2 NM_166477.2 NP_001286694 NP_001286694.1 NP_001286695.1 NP_726106.1 NP_726107.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
HmgZ-RA	FBtr0071674	1184	111aa	FBpp0071591	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG36 Q06943	NM_001299765.1 NM_001299766.1 NM_166476 NM_166476.2 NM_166477.2 NP_001286694.1 NP_001286695.1 NP_726106 NP_726106.1 NP_726107.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
HmgZ-RD	FBtr0345488	765	111aa	FBpp0311599	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG36 Q06943	NM_001299765.1 NM_001299766 NM_001299766.1 NM_166476.2 NM_166477.2 NP_001286694.1 NP_001286695 NP_001286695.1 NP_726106.1 NP_726107.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
HmgZ-RB	FBtr0071673	707	111aa	FBpp0071590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LG36 Q06943	NM_001299765.1 NM_001299766.1 NM_166476.2 NM_166477 NM_166477.2 NP_001286694.1 NP_001286695.1 NP_726106.1 NP_726107 NP_726107.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays