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DB built by FlyBase

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Gene: Uch FBgn0010288

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Description

Ubiquitin carboxy-terminal hydrolase

Gene Synonyms

Location

Primary_assembly 2L: 2,212,738-2,214,211 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 29 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Uch-RA	FBtr0077844	1196	227aa	FBpp0077516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD0 P35122	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Uch-RB	FBtr0303459	1044	227aa	FBpp0292511	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRD0 P35122	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Uch-RC	FBtr0330676	1035	224aa	FBpp0303526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PE40	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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