Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: CASK FBgn0013759

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Description

CASK

Location

Primary_assembly 3R: 21,783,400-21,822,674 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 8 transcripts (splice variants), 142 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CASK-RF	FBtr0301327	6544	916aa	FBpp0290542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIS7	NM_001170210 NM_001170210.2 NP_001163681 NP_001163681.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CASK-RH	FBtr0330368	4128	929aa	FBpp0303394	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KH39	NM_001275882 NM_001275882.1 NP_001262811 NP_001262811.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical
CASK-RG	FBtr0301328	4071	609aa	FBpp0290543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_169971 NM_169971.3 NP_732662 NP_732662.2
CASK-RD	FBtr0112872	4017	591aa	FBpp0111785	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR71	NM_001104392 NM_001104392.3 NM_169970.2 NP_001097862 NP_001097862.1 NP_732661.1
CASK-RB	FBtr0084161	3965	898aa	FBpp0083559	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q24210	NM_001104392.3 NM_079717 NM_079717.4 NM_169970.2 NM_169971.3 NP_001097862.1 NP_524441 NP_524441.2 NP_732661.1 NP_732662.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
CASK-RA	FBtr0084162	3949	591aa	FBpp0083560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR71	NM_001104392.3 NM_169970 NM_169970.2 NP_001097862.1 NP_732661 NP_732661.1
CASK-RI	FBtr0479755	3164	522aa	FBpp0428098	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EEU7	-
CASK-RE	FBtr0112873	2586	469aa	FBpp0111786	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR72	NM_001104393 NM_001104393.3 NP_001097863 NP_001097863.1

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Summary

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Gene-based displays