Rab5
Primary_assembly 2L: 2,359,142-2,365,273 reverse strand.
BDGP6.32:AE014134.6
This gene has 9 transcripts (splice variants), 133 orthologues and 33 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Rab5-RC | FBtr0077796 | 2491 | 219aa | FBpp0077473 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797 NP_722797.1 NP_722798.1 NP_722799.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RE | FBtr0077797 | 2182 | 219aa | FBpp0077474 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RB | FBtr0077793 | 1871 | 219aa | FBpp0077470 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RG | FBtr0330668 | 1785 | 219aa | FBpp0303518 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996 NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RI | FBtr0330670 | 1775 | 219aa | FBpp0303520 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RH | FBtr0330669 | 1772 | 219aa | FBpp0303519 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RA | FBtr0077798 | 1765 | 219aa | FBpp0077475 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RD | FBtr0077795 | 1739 | 219aa | FBpp0077472 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798 NP_722798.1 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| Rab5-RF | FBtr0077794 | 1719 | 219aa | FBpp0077471 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9V3I2 | NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799 NP_722799.1 | APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
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