Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: Rab5 FBgn0014010

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Description

Rab5

Location

Primary_assembly 2L: 2,359,142-2,365,273 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 9 transcripts (splice variants), 127 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rab5-RC	FBtr0077796	2491	219aa	FBpp0077473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RE	FBtr0077797	2182	219aa	FBpp0077474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RB	FBtr0077793	1871	219aa	FBpp0077470	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RG	FBtr0330668	1785	219aa	FBpp0303518	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996 NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RI	FBtr0330670	1775	219aa	FBpp0303520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RH	FBtr0330669	1772	219aa	FBpp0303519	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RA	FBtr0077798	1765	219aa	FBpp0077475	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RD	FBtr0077795	1739	219aa	FBpp0077472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478 NM_164478.2 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798 NP_722798.1 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Rab5-RF	FBtr0077794	1719	219aa	FBpp0077471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V3I2	NM_001272996.1 NM_001272997.1 NM_001272998.1 NM_078733.4 NM_164475.2 NM_164476.2 NM_164477.3 NM_164478.2 NM_164479 NM_164479.2 NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799 NP_722799.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays