Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Supporting evidence
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DB built by FlyBase

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Gene: bnl FBgn0014135

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Description

branchless

Gene Synonyms

Location

Primary_assembly 3R: 19,794,073-19,836,817 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 114 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
bnl-RA	FBtr0083795	3632	770aa	FBpp0083206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P91672 Q9VDT9	NM_169874 NM_169874.1 NP_732452 NP_732452.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
bnl-RC	FBtr0300123	4295	760aa	FBpp0289400	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86NQ2	NM_001144611 NM_001144611.1 NM_001300482.1 NP_001138083 NP_001138083.1 NP_001287411.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
bnl-RD	FBtr0344549	4073	760aa	FBpp0310902	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86NQ2	NM_001144611.1 NM_001300482 NM_001300482.1 NP_001138083.1 NP_001287411 NP_001287411.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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