Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
Ontologies
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: His3.3A FBgn0014857

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Description

Histone H3.3A

Gene Synonyms

Location

Primary_assembly 2L: 5,055,058-5,056,149 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 114 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
His3.3A-RC	FBtr0333536	926	136aa	FBpp0305716	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0HL66 C0HL67 P84249	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
His3.3A-RA	FBtr0079010	848	136aa	FBpp0078649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0HL66 C0HL67 P84249	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
His3.3A-RD	FBtr0333537	772	136aa	FBpp0305717	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0HL66 C0HL67 P84249	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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