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DB built by FlyBase

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Gene: Fer2LCH FBgn0015221

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Description

Ferritin 2 light chain homologue

Gene Synonyms

Location

Primary_assembly 3R: 30,387,804-30,390,584 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 5 transcripts (splice variants), 121 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Fer2LCH-RE	FBtr0332169	1118	236aa	FBpp0304478	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHF0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Fer2LCH-RB	FBtr0085623	1443	227aa	FBpp0084987	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VA83	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Fer2LCH-RA	FBtr0085622	1284	227aa	FBpp0084986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VA83	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Fer2LCH-RD	FBtr0332168	1091	227aa	FBpp0304477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VA83	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Fer2LCH-RC	FBtr0085624	1078	227aa	FBpp0084988	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U4U2 Q9U7A3 Q9VA83	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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