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DB built by FlyBase

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Gene: lama FBgn0016031

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Description

lamina ancestor

Gene Synonyms

Location

Primary_assembly 3L: 5,343,619-5,355,923 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants) and 204 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
lama-RD	FBtr0333595	3655	658aa	FBpp0305772	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I0E2J7 Q9VRK8	NM_001274511 NM_001274511.1 NM_079209.3 NM_168115.2 NM_168116.2 NP_001261440 NP_001261440.1 NP_523933.3 NP_729059.2 NP_729060.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
lama-RB	FBtr0077160	3546	658aa	FBpp0076863	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I0E2J7 Q9VRK8	NM_001274511.1 NM_079209 NM_079209.3 NM_168115.2 NM_168116.2 NP_001261440.1 NP_523933 NP_523933.3 NP_729059.2 NP_729060.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
lama-RC	FBtr0077159	3044	658aa	FBpp0076862	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I0E2J7 Q9VRK8	NM_001274511.1 NM_079209.3 NM_168115.2 NM_168116 NM_168116.2 NP_001261440.1 NP_523933.3 NP_729059.2 NP_729060 NP_729060.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
lama-RA	FBtr0077161	2975	658aa	FBpp0076864	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I0E2J7 Q9VRK8	NM_001274511.1 NM_079209.3 NM_168115 NM_168115.2 NM_168116.2 NP_001261440.1 NP_523933.3 NP_729059 NP_729059.2 NP_729060.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays