Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Molecular interactions
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External references
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ID History
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DB built by FlyBase

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Gene: U2af38 FBgn0017457

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Description

U2 small nuclear riboprotein auxiliary factor 38

Gene Synonyms

Location

Primary_assembly 2L: 292,959-294,681 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
U2af38-RB	FBtr0333408	1655	264aa	FBpp0305600	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBM1 Q94535	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
U2af38-RA	FBtr0078133	1261	264aa	FBpp0077792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBM1 Q94535	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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