Summary
- Splice variants
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DB built by FlyBase

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Gene: toy FBgn0019650

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Description

twin of eyeless

Gene Synonyms

Location

Primary_assembly 4: 989,725-1,007,922 forward strand.

BDGP6.32:AE014135.4

About this gene

This gene has 3 transcripts (splice variants), 120 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
toy-RD	FBtr0479793	3921	655aa	FBpp0428126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6H2EG63 Q9XZC2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
toy-RC	FBtr0339509	3870	526aa	FBpp0308592	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MPR7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
toy-RA	FBtr0089185	2287	543aa	FBpp0088249	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V490	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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