Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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ID History
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DB built by FlyBase

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Gene: Ppa FBgn0020257

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Description

Partner of paired

Location

Primary_assembly 2R: 22,684,955-22,688,987 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 122 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ppa-RC	FBtr0343014	4033	538aa	FBpp0309766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W214	NM_001299814 NM_001299814.1 NM_079088.3 NP_001286743 NP_001286743.1 NP_523812.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Ppa-RA	FBtr0071924	3463	538aa	FBpp0071835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W214	NM_001299814.1 NM_079088 NM_079088.3 NP_001286743.1 NP_523812 NP_523812.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Ppa-RB	FBtr0330249	3463	562aa	FBpp0303282	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KF28	NM_001274209 NM_001274209.2 NP_001261138 NP_001261138.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays