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DB built by FlyBase

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Gene: Nup154 FBgn0021761

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Description

Nucleoporin 154kD

Gene Synonyms

Location

Primary_assembly 2L: 11,004,820-11,010,921 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 151 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nup154-RD	FBtr0340225	5420	1365aa	FBpp0309200	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V463	NM_001298898 NM_001298898.1 NM_057939.4 NM_057940.4 NP_001285827 NP_001285827.1 NP_477287.1 NP_477288.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Nup154-RC	FBtr0340224	4612	1365aa	FBpp0309199	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V463	NM_001298898.1 NM_057939.4 NM_057940 NM_057940.4 NP_001285827.1 NP_477287.1 NP_477288 NP_477288.3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Nup154-RA	FBtr0089881	4371	1365aa	FBpp0088820	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V463	NM_001298898.1 NM_057939 NM_057939.4 NM_057940.4 NP_001285827.1 NP_477287 NP_477287.1 NP_477288.3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays