Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Metazoan Compara
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DB built by FlyBase

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Gene: CG1910 FBgn0022349

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Gene Synonyms

Location

Primary_assembly 3R: 31,747,643-31,751,894 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1910-RA	FBtr0085839	3015	489aa	FBpp0085198	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86PC7 Q9U4Q7 Q9V9U3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG1910-RD	FBtr0085840	2698	439aa	FBpp0085199	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I0J1	-	-
CG1910-RC	FBtr0085841	2628	466aa	FBpp0085200	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O16040 Q7KLV0 Q8IGY5 Q8IMG1 Q9TVG2 Q9TW87 Q9U4Q6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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