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DB built by FlyBase

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Gene: fray FBgn0023083

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Description

frayed

Location

Primary_assembly 3R: 18,573,091-18,589,459 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 8 transcripts (splice variants), 125 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
fray-RA	FBtr0083637	3628	552aa	FBpp0083057	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606.1 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960 NM_057960.4 NM_169823.2 NP_001138077.1 NP_001138078.1 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RC	FBtr0290107	3610	552aa	FBpp0288546	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605 NM_001144605.2 NM_001144606.1 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960.4 NM_169823.2 NP_001138077 NP_001138077.1 NP_001138078.1 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RG	FBtr0344290	3569	552aa	FBpp0310694	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606.1 NM_001144607.2 NM_001300466 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960.4 NM_169823.2 NP_001138077.1 NP_001138078.1 NP_001138079.1 NP_001287395 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RJ	FBtr0479756	3464	707aa	FBpp0428099	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUV7 Q9VE62	NM_001316520.1 NP_001303449.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
fray-RI	FBtr0347418	3373	552aa	FBpp0312568	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606.1 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521 NM_001316521.1 NM_057960.4 NM_169823.2 NP_001138077.1 NP_001138078.1 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450 NP_001303450.1 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RF	FBtr0290210	3363	552aa	FBpp0288649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606.1 NM_001144607 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960.4 NM_169823.2 NP_001138077.1 NP_001138078.1 NP_001138079 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RB	FBtr0083638	3289	552aa	FBpp0083058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606.1 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960.4 NM_169823 NM_169823.2 NP_001138077.1 NP_001138078.1 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308.1 NP_732352 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
fray-RE	FBtr0290209	3270	552aa	FBpp0288648	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSD3	NM_001144605.2 NM_001144606 NM_001144606.1 NM_001144607.2 NM_001300466.1 NM_001316520.1 NM_001316521.1 NM_057960.4 NM_169823.2 NP_001138077.1 NP_001138078 NP_001138078.1 NP_001138079.1 NP_001287395.1 NP_001303449.1 NP_001303450.1 NP_477308.1 NP_732352.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays