Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: alphaCOP FBgn0025725

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Description

Coat Protein (coatomer) alpha

Gene Synonyms

Location

Primary_assembly 3L: 1,641,066-1,645,199 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
alphaCOP-RA	FBtr0072812	4078	1234aa	FBpp0072694	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O77285 Q9W0B8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
alphaCOP-RB	FBtr0072811	3970	1234aa	FBpp0072693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0B8	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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