Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
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Genetic Variation
- Variant table
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External references
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ID History
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DB built by FlyBase

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Gene: Gasp FBgn0026077

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Description

Gasp

Gene Synonyms

Location

Primary_assembly 3R: 6,088,799-6,100,887 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 157 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Gasp-RA	FBtr0078619	1460	258aa	FBpp0078268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O97377 Q9VNL0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Gasp-RB	FBtr0112922	1683	235aa	FBpp0111835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JQU3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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