Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: CBP FBgn0026144

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Description

sarcoplasmic calcium-binding protein

Gene Synonyms

Location

Primary_assembly X: 7,337,352-7,342,731 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 83 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CBP-RC	FBtr0329894	2185	551aa	FBpp0302928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHB8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CBP-RB	FBtr0071053	2225	231aa	FBpp0089293	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVU4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CBP-RA	FBtr0071052	2185	298aa	FBpp0071011	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O96676	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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