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DB built by FlyBase

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Gene: Su(var)2-HP2 FBgn0026427

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Description

Su(var)2-HP2

Gene Synonyms

Location

Primary_assembly 2R: 14,607,154-14,618,118 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 11 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Su(var)2-HP2-RA	FBtr0087501	10289	3257aa	FBpp0086630	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9S6 Q960Y9	NM_137128 NM_137128.4 NP_610972 NP_610972.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Su(var)2-HP2-RB	FBtr0087502	5417	1633aa	FBpp0086631	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9S5	NM_176174 NM_176174.3 NP_788354 NP_788354.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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