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DB built by FlyBase

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Gene: tacc FBgn0026620

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Description

transforming acidic coiled-coil protein

Gene Synonyms

Location

Primary_assembly 3R: 4,733,654-4,749,056 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 13 transcripts (splice variants) and 130 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tacc-RK	FBtr0302616	5706	1322aa	FBpp0291772	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tacc-RC	FBtr0089953	4906	1308aa	FBpp0088892	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TU9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RD	FBtr0089952	4861	1293aa	FBpp0088891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BB5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RN	FBtr0332446	4789	1225aa	FBpp0304719	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6I7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RM	FBtr0332445	4637	1320aa	FBpp0304718	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFK1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RI	FBtr0302614	4596	1227aa	FBpp0291770	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN51 Q9XZL7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RA	FBtr0089955	4593	1226aa	FBpp0088894	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPN1 Q9NJH5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RJ	FBtr0302615	4554	1213aa	FBpp0291771	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCV4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RL	FBtr0306654	4475	1225aa	FBpp0297609	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K6I7 D4G7B6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tacc-RH	FBtr0302613	2599	245aa	FBpp0291769	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BB4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
tacc-RG	FBtr0089950	1834	245aa	FBpp0088889	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BB4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
tacc-RE	FBtr0089949	1799	245aa	FBpp0088888	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BB4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
tacc-RF	FBtr0089951	1792	245aa	FBpp0088890	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BB4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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