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DB built by FlyBase

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Gene: LysRS FBgn0027084

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Description

Lysyl-tRNA synthetase

Gene Synonyms

Location

Primary_assembly X: 9,606,363-9,608,884 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 136 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LysRS-RB	FBtr0071367	2223	607aa	FBpp0071302	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G7H7Z0 Q9W327	NM_001201642.2 NM_167196 NM_167196.3 NP_001188571.1 NP_727353 NP_727353.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
LysRS-RC	FBtr0303560	2160	607aa	FBpp0292593	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W327	NM_001201642 NM_001201642.2 NM_167196.3 NP_001188571 NP_001188571.1 NP_727353.1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
LysRS-RA	FBtr0071366	1969	574aa	FBpp0071301	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXM8	NM_132345 NM_132345.2 NP_572573 NP_572573.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays