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- Splice variants
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DB built by FlyBase

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Gene: Nulp1 FBgn0027549

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Description

Nuclear localized protein 1

Gene Synonyms

Location

Primary_assembly 3L: 8,110,368-8,113,406 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants) and 173 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Nulp1-RC	FBtr0334615	2474	702aa	FBpp0306682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y109	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Nulp1-RB	FBtr0333949	2618	653aa	FBpp0306074	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBV6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Nulp1-RA	FBtr0076684	2388	702aa	FBpp0076407	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y109	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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