Summary
- Splice variants
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DB built by FlyBase

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Gene: Tob FBgn0028397

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Description

Transducer of ERBB2

Gene Synonyms

Location

Primary_assembly X: 16,074,717-16,091,495 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 110 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tob-RF	FBtr0310446	4596	564aa	FBpp0302594	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U6U1 Q9VXJ9	NM_001169301 NM_001169301.2 NM_132876.5 NP_001162772 NP_001162772.1 NP_573104.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Tob-RC	FBtr0301652	7852	536aa	FBpp0290866	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NQY2	NM_001169300 NM_001169300.3 NP_001162771 NP_001162771.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tob-RA	FBtr0074255	3639	564aa	FBpp0074033	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXJ9	NM_001169301.2 NM_132876 NM_132876.5 NP_001162772.1 NP_573104 NP_573104.1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Tob-RE	FBtr0310317	3304	533aa	FBpp0302000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V4L0	NM_206760 NM_206760.3 NP_996483 NP_996483.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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