Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: JhI-21 FBgn0028425

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Location

Chromosome 2L: 12,051,755-12,056,042 reverse strand.

BDGP6.28:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 169 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0346427	2182	500aa	FBpp0312092	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKC2	NM_001259067.1 NM_001298934.1 NM_001298935.1 NM_135698.4 NM_164988.4 NP_001245996.1 NP_001285863.1 NP_001285864.1 NP_609542.1 NP_723717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0305089	2149	500aa	FBpp0293626	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKC2	NM_001259067.1 NM_001298934.1 NM_001298935.1 NM_135698.4 NM_164988.4 NP_001245996.1 NP_001285863.1 NP_001285864.1 NP_609542.1 NP_723717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0089655	2125	500aa	FBpp0088598	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKC2	NM_001259067.1 NM_001298934.1 NM_001298935.1 NM_135698.4 NM_164988.4 NP_001245996.1 NP_001285863.1 NP_001285864.1 NP_609542.1 NP_723717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0342608	2119	500aa	FBpp0309548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKC2	NM_001259067.1 NM_001298934.1 NM_001298935.1 NM_135698.4 NM_164988.4 NP_001245996.1 NP_001285863.1 NP_001285864.1 NP_609542.1 NP_723717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0089656	2089	500aa	FBpp0088925	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VKC2	NM_001259067.1 NM_001298934.1 NM_001298935.1 NM_135698.4 NM_164988.4 NP_001245996.1 NP_001285863.1 NP_001285864.1 NP_609542.1 NP_723717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays