Summary
- Splice variants
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DB built by FlyBase

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Gene: Fmr1 FBgn0028734

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Description

Fmr1

Location

Primary_assembly 3R: 10,101,420-10,110,121 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 11 transcripts (splice variants) and 113 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Fmr1-RC	FBtr0082198	4426	681aa	FBpp0081676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS7	NM_001316514.1 NM_001316515.1 NM_169324 NM_169324.2 NM_169325.3 NP_001303443.1 NP_001303444.1 NP_731443 NP_731443.1 NP_731444.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RG	FBtr0308123	4426	729aa	FBpp0300445	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4K618	NM_001260088 NM_001260088.1 NP_001247017 NP_001247017.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Fmr1-RE	FBtr0082200	3920	643aa	FBpp0081678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_169326 NM_169326.3 NP_731445 NP_731445.1
Fmr1-RF	FBtr0301386	3773	646aa	FBpp0290600	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3LF78	NM_001170109 NM_001170109.2 NP_001163580 NP_001163580.1
Fmr1-RI	FBtr0335049	3752	639aa	FBpp0307053	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KFN9	NM_001275519 NM_001275519.1 NP_001262448 NP_001262448.1
Fmr1-RA	FBtr0082197	3381	684aa	FBpp0081675	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NFU0	NM_001316514.1 NM_001316515.1 NM_137801 NM_137801.4 NM_169324.2 NM_169325.3 NM_169326.3 NM_169327.2 NP_001303443.1 NP_001303444.1 NP_611645 NP_611645.1 NP_731443.1 NP_731444.1 NP_731445.1 NP_731446.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RJ	FBtr0347104	2985	681aa	FBpp0312465	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS7	NM_001316514 NM_001316514.1 NM_001316515.1 NM_169324.2 NM_169325.3 NP_001303443 NP_001303443.1 NP_001303444.1 NP_731443.1 NP_731444.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RD	FBtr0082199	2967	681aa	FBpp0081677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS7	NM_001316514.1 NM_001316515.1 NM_169324.2 NM_169325 NM_169325.3 NP_001303443.1 NP_001303444.1 NP_731443.1 NP_731444 NP_731444.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RK	FBtr0347105	2896	681aa	FBpp0312466	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A126GUS7	NM_001316514.1 NM_001316515 NM_001316515.1 NM_169324.2 NM_169325.3 NP_001303443.1 NP_001303444 NP_001303444.1 NP_731443.1 NP_731444.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RB	FBtr0082196	2266	529aa	FBpp0081674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3G0S3 B3G0S8 B3G0T0	NM_169327 NM_169327.2 NP_731446 NP_731446.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Fmr1-RH	FBtr0335048	2266	577aa	FBpp0307052	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGP6	NM_001275518 NM_001275518.1 NP_001262447 NP_001262447.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays