Summary
- Splice variants
- Transcript comparison
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Sequence
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- Gene tree (Protostomes)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG18095 FBgn0028872

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Gene Synonyms

Location

Primary_assembly 2L: 14,029,262-14,031,539 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 11 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG18095-RB	FBtr0303242	1838	564aa	FBpp0292334	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E4NKG8 M9MSI4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG18095-RA	FBtr0080606	2036	548aa	FBpp0080180	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJU1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG18095-RC	FBtr0343692	1677	548aa	FBpp0310279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJU1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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