Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG12535 FBgn0029657

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Location

Primary_assembly X: 3,387,944-3,448,943 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 14 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12535-RF	FBtr0344078	5934	205aa	FBpp0310505	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRU2	NM_001272276.1 NM_001272277.1 NM_001297909 NM_001297909.1 NM_130699.2 NM_166972.2 NP_001259205.1 NP_001259206.1 NP_001284838 NP_001284838.1 NP_570055.2 NP_726860.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG12535-RC	FBtr0332302	1824	205aa	FBpp0304581	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRU2	NM_001272276 NM_001272276.1 NM_001272277.1 NM_001297909.1 NM_130699.2 NM_166972.2 NP_001259205 NP_001259205.1 NP_001259206.1 NP_001284838.1 NP_570055.2 NP_726860.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG12535-RE	FBtr0332304	1643	205aa	FBpp0304583	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRU2	NM_001272276.1 NM_001272277 NM_001272277.1 NM_001297909.1 NM_130699.2 NM_166972.2 NP_001259205.1 NP_001259206 NP_001259206.1 NP_001284838.1 NP_570055.2 NP_726860.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG12535-RD	FBtr0332303	1603	205aa	FBpp0304582	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRU2	NM_001272276.1 NM_001272277.1 NM_001297909.1 NM_130699 NM_130699.2 NM_166972.2 NP_001259205.1 NP_001259206.1 NP_001284838.1 NP_570055 NP_570055.2 NP_726860.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG12535-RB	FBtr0070534	1392	205aa	FBpp0070509	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IRU2	NM_001272276.1 NM_001272277.1 NM_001297909.1 NM_130699.2 NM_166972 NM_166972.2 NP_001259205.1 NP_001259206.1 NP_001284838.1 NP_570055.2 NP_726860 NP_726860.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays