Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: Shmt FBgn0029823

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Description

Serine hydroxymethyl transferase

Location

Primary_assembly X: 5,913,067-5,916,797 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 128 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Shmt-RB	FBtr0290235	2054	467aa	FBpp0288674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0X1	NM_001144690 NM_001144690.2 NM_001297987.1 NP_001138162 NP_001138162.1 NP_001284916.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Shmt-RA	FBtr0070827	2001	537aa	FBpp0070792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W457	NM_132050 NM_132050.2 NP_572278 NP_572278.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Shmt-RC	FBtr0345317	1592	467aa	FBpp0311477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9YJ06 A9YJ07 A9YJ11 B7Z0X1 F6J3U3	NM_001144690.2 NM_001297987 NM_001297987.1 NP_001138162.1 NP_001284916 NP_001284916.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays