Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG3566 FBgn0029854

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Gene Synonyms

Location

Primary_assembly X: 6,274,972-6,276,724 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 18 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3566-RB	FBtr0089870	550	117aa	FBpp0088809	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2NUJ7 Q8IRR0	NM_132076 NM_132076.7 NP_572304 NP_572304.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3566-RC	FBtr0089869	1607	89aa	FBpp0088808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SY77	NM_206632 NM_206632.3 NP_996355 NP_996355.1	-
CG3566-RD	FBtr0305177	770	106aa	FBpp0293707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEX3	NM_001258619 NM_001258619.2 NP_001245548 NP_001245548.1	-

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Summary

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Gene-based displays