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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- GO: Cellular component
- GO: Molecular function
- GO: Biological process
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DB built by FlyBase

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Gene: slpr FBgn0030018

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Description

slipper

Gene Synonyms

Location

Primary_assembly X: 8,170,229-8,177,185 reverse strand.

BDGP6.54:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 66 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
slpr-RB	FBtr0303842	5165	1155aa	FBpp0292850	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UUR7 M9MSN2 Q95UN8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
slpr-RC	FBtr0303843	5594	1148aa	FBpp0292851	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS26	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
slpr-RA	FBtr0071184	5144	1148aa	FBpp0099601	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS26	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
slpr-RD	FBtr0303844	4945	1148aa	FBpp0292852	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MS26	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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