Summary
- Splice variants
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DB built by FlyBase

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Gene: CG1552 FBgn0030258

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Gene Synonyms

Location

Primary_assembly X: 11,052,171-11,053,556 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 10 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG1552-RC	FBtr0346272	1060	184aa	FBpp0312029	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RJH2 D3PK82 Q9VZ40 X2JES6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG1552-RA	FBtr0073396	837	184aa	FBpp0073252	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZ40 X2JES6	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
CG1552-RB	FBtr0073397	798	171aa	FBpp0073253	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3PK80 H0RNL3	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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