Primary_assembly X: 11,877,737-11,887,162 reverse strand.
BDGP6.32:AE014298.5
This gene has 7 transcripts (splice variants), 66 orthologues and 4 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
CG10353-RD | FBtr0114452 | 4774 | 1029aa | FBpp0112944 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3PFF9 Q76NS2 | NM_001258704.1 NM_001272540.1 NM_167312 NM_167312.4 NP_001245633.1 NP_001259469.1 NP_727578 NP_727578.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG10353-RI | FBtr0331594 | 4771 | 984aa | FBpp0303984 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VYS8 | NM_001272543 NM_001272543.1 NM_132534.4 NP_001259472 NP_001259472.1 NP_572762.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
CG10353-RE | FBtr0308070 | 4569 | 1029aa | FBpp0300413 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q76NS2 | NM_001258704 NM_001258704.1 NM_001272540.1 NM_167312.4 NP_001245633 NP_001245633.1 NP_001259469.1 NP_727578.3 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG10353-RF | FBtr0331591 | 4492 | 1029aa | FBpp0303981 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q76NS2 | NM_001258704.1 NM_001272540 NM_001272540.1 NM_167312.4 NP_001245633.1 NP_001259469 NP_001259469.1 NP_727578.3 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
CG10353-RK | FBtr0344702 | 4482 | 1000aa | FBpp0311035 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PJJ8 Q8MT62 | NM_001272544 NM_001272544.2 NP_001259473 NP_001259473.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
CG10353-RL | FBtr0344703 | 4290 | 1013aa | FBpp0311036 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PGX9 | NM_001272541 NM_001272541.2 NP_001259470 NP_001259470.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
CG10353-RC | FBtr0114451 | 4203 | 984aa | FBpp0112943 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VYS8 | NM_001272543.1 NM_132534 NM_132534.4 NP_001259472.1 NP_572762 NP_572762.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |