Summary
- Splice variants
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Molecular function
- GO: Cellular component
- GO: Biological process
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Genetic Variation
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DB built by FlyBase

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Gene: CG9911 FBgn0030734

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Gene Synonyms

Location

Primary_assembly X: 16,293,853-16,297,718 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 194 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9911-RA	FBtr0074243	1503	412aa	FBpp0074022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TL8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9911-RD	FBtr0074241	1477	412aa	FBpp0074020	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TL8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9911-RB	FBtr0074242	1426	412aa	FBpp0074021	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TL8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG9911-RC	FBtr0074244	1364	375aa	FBpp0074023	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXI3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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