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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree (Drosophilidae)
- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG8188 FBgn0030863

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Gene Synonyms

Location

Primary_assembly X: 17,698,917-17,703,024 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 65 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG8188-RD	FBtr0346186	3297	209aa	FBpp0312005	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX25 X2JFX0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG8188-RA	FBtr0074476	2689	209aa	FBpp0074250	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX25 X2JFX0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG8188-RC	FBtr0340633	2442	209aa	FBpp0309497	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX25 X2JFX0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG8188-RB	FBtr0100463	2119	209aa	FBpp0099891	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VX25 X2JFX0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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