Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG12531 FBgn0031064

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Gene Synonyms

Location

Primary_assembly X: 19,718,923-19,730,199 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 2 transcripts (splice variants), 239 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12531-RA	FBtr0074788	6764	812aa	FBpp0074557	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G7H832 Q9VWD3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG12531-RB	FBtr0335043	6761	811aa	FBpp0307047	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHM0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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