Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG4822 FBgn0031220

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Location

Primary_assembly 2L: 116,970-121,754 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 9 transcripts (splice variants), 56 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4822-RB	FBtr0078159	4008	677aa	FBpp0077817	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E8NH11 Q8MQW6 Q9VPJ7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4822-RF	FBtr0100308	2885	677aa	FBpp0099713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPJ7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4822-RE	FBtr0100307	2749	677aa	FBpp0099712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPJ7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4822-RC	FBtr0078157	2742	677aa	FBpp0077815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPJ7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4822-RD	FBtr0078158	2656	677aa	FBpp0077816	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPJ7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG4822-RG	FBtr0100309	2597	144aa	FBpp0099714	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PDV9	-	-
CG4822-RH	FBtr0100310	2505	110aa	FBpp0099715	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PDV8	-	-
CG4822-RI	FBtr0330646	2457	120aa	FBpp0303496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PBY9	-	-
CG4822-RA	FBtr0078156	2456	677aa	FBpp0077814	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPJ7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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