Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG4896 FBgn0031319

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Location

Primary_assembly 2L: 1,177,690-1,182,454 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 114 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4896-RJ	FBtr0335395	3956	262aa	FBpp0307378	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDC4	NM_001258901 NM_001258901.2 NM_001258902.2 NP_001245830 NP_001245830.2 NP_001245831.1
CG4896-RG	FBtr0308698	3781	262aa	FBpp0300904	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDC4	NM_001258901.2 NM_001258902 NM_001258902.2 NP_001245830.2 NP_001245831 NP_001245831.1
CG4896-RK	FBtr0344790	3193	947aa	FBpp0311118	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPW6	NM_164409 NM_164409.4 NP_722689 NP_722689.4	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG4896-RD	FBtr0077968	3192	949aa	FBpp0077633	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A023GRW3 D0Z744 Q6NQZ3 Q8IHG7	NM_134739 NM_134739.6 NP_608583 NP_608583.5	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG4896-RI	FBtr0335394	3118	265aa	FBpp0307377	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDX7	NM_001272931 NM_001272931.1 NP_001259860 NP_001259860.1

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Summary

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Gene-based displays