Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Gene families
Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG3104 FBgn0031473

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Gene Synonyms

Location

Primary_assembly 2L: 2,848,989-2,855,778 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 77 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3104-RC	FBtr0335132	2395	321aa	FBpp0307131	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQI1	NM_001273040 NM_001273040.1 NM_134880.2 NM_164505.2 NP_001259969 NP_001259969.1 NP_608724.1 NP_722852.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3104-RA	FBtr0077686	2213	321aa	FBpp0077370	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQI1	NM_001273040.1 NM_134880 NM_134880.2 NM_164505.2 NP_001259969.1 NP_608724 NP_608724.1 NP_722852.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3104-RB	FBtr0077687	1933	321aa	FBpp0077371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VQI1	NM_001273040.1 NM_134880.2 NM_164505 NM_164505.2 NP_001259969.1 NP_608724.1 NP_722852 NP_722852.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays