Otopetrin-like b
Primary_assembly 2L: 3,275,800-3,280,534 reverse strand.
BDGP6.32:AE014134.6
This gene has 4 transcripts (splice variants), 117 orthologues and 2 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
OtopLb-RA | FBtr0077609 | 2656 | 797aa | FBpp0077296 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VQN3 | NM_134914 NM_134914.3 NP_608758 NP_608758.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
OtopLb-RC | FBtr0340589 | 2653 | 796aa | FBpp0309470 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JD17 | NM_001298651 NM_001298651.1 NP_001285580 NP_001285580.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
OtopLb-RB | FBtr0077608 | 2216 | 629aa | FBpp0077295 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ02 | NM_164531 NM_164531.2 NP_722888 NP_722888.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
OtopLb-RD | FBtr0344796 | 2206 | 647aa | FBpp0311124 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2J8I0 | NM_001298652 NM_001298652.1 NP_001285581 NP_001285581.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |