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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: jet FBgn0031652

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Description

jetlag

Gene Synonyms

Location

Primary_assembly 2L: 4,948,206-4,949,784 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 41 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
jet-RA	FBtr0079057	1453	319aa	FBpp0078693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5H0I4 B5RIQ5 Q8T0E8 Q9VMY0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
jet-RB	FBtr0110896	1241	313aa	FBpp0110196	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8T8	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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