Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG9527 FBgn0031813

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Location

Primary_assembly 2L: 6,426,724-6,448,403 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 162 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9527-RC	FBtr0329952	2603	703aa	FBpp0302984	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMD7	NM_001273202 NM_001273202.2 NM_001298742.1 NM_135183.5 NP_001260131 NP_001260131.1 NP_001285671.1 NP_609027.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9527-RD	FBtr0345720	2361	703aa	FBpp0311763	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VMD7	NM_001273202.2 NM_001298742 NM_001298742.1 NM_135183.5 NP_001260131.1 NP_001285671 NP_001285671.1 NP_609027.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9527-RB	FBtr0114603	2237	724aa	FBpp0113095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z028	NM_001144328 NM_001144328.2 NP_001137800 NP_001137800.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG9527-RA	FBtr0089948	2222	703aa	FBpp0088887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SYT1 Q9VMD7	NM_001273202.2 NM_001298742.1 NM_135183 NM_135183.5 NP_001260131.1 NP_001285671.1 NP_609027 NP_609027.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays