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DB built by FlyBase

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Gene: CYLD FBgn0032210

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Description

Cylindromatosis

Gene Synonyms

Location

Primary_assembly 2L: 10,295,859-10,299,847 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CYLD-RD	FBtr0080070	2095	639aa	FBpp0079659	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPC5 Q8SYF0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CYLD-RE	FBtr0080071	2073	639aa	FBpp0079660	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPC5	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CYLD-RB	FBtr0080072	1846	551aa	FBpp0079661	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IPC3	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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