Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
- Variant image
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DB built by FlyBase

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Gene: CG16825 FBgn0032503

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Location

Primary_assembly 2L: 13,304,788-13,307,807 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants) and 11 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG16825-RB	FBtr0329824	3020	281aa	FBpp0302873	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VK02	NM_001273514 NM_001273514.1 NM_135792.3 NP_001260443 NP_001260443.1 NP_609636.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG16825-RA	FBtr0080463	1888	281aa	FBpp0080042	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T4H4 Q9VK02	NM_001273514.1 NM_135792 NM_135792.3 NP_001260443.1 NP_609636 NP_609636.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays