Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG5953 FBgn0032587

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Location

Primary_assembly 2L: 16,508,078-16,532,877 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5953-RD	FBtr0337091	4576	701aa	FBpp0308008	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJK4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5953-RB	FBtr0080874	3796	701aa	FBpp0080431	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJK4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5953-RA	FBtr0080873	3534	701aa	FBpp0080430	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJK4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5953-RC	FBtr0301144	2535	473aa	FBpp0290367	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IJ65 E1JHJ2	-	-

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Summary

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