Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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DB built by FlyBase

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Gene: CG17544 FBgn0032775

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Location

Primary_assembly 2L: 19,390,370-19,398,493 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 366 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG17544-RC	FBtr0081217	2565	693aa	FBpp0080758	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIX4	NM_001169544.2 NM_136117.4 NM_165290.4 NM_165291 NM_165291.3 NP_001163015.1 NP_609961.2 NP_724180.1 NP_724181 NP_724181.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG17544-RD	FBtr0300822	2553	693aa	FBpp0290046	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TH0 Q9VIX4	NM_001169544 NM_001169544.2 NM_136117.4 NM_165290.4 NM_165291.3 NP_001163015 NP_001163015.1 NP_609961.2 NP_724180.1 NP_724181.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG17544-RA	FBtr0081216	2549	693aa	FBpp0080757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIX4	NM_001169544.2 NM_136117 NM_136117.4 NM_165290.4 NM_165291.3 NP_001163015.1 NP_609961 NP_609961.2 NP_724180.1 NP_724181.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG17544-RB	FBtr0081218	2474	693aa	FBpp0080759	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIX4	NM_001169544.2 NM_136117.4 NM_165290 NM_165290.4 NM_165291.3 NP_001163015.1 NP_609961.2 NP_724180 NP_724180.1 NP_724181.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays