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DB built by FlyBase

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Gene: Mondo FBgn0032940

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Description

Mondo

Gene Synonyms

Location

Primary_assembly 2L: 21,286,078-21,310,050 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 11 transcripts (splice variants), 73 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Mondo-RH	FBtr0301459	4837	1119aa	FBpp0290674	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RF	FBtr0301457	4834	1119aa	FBpp0290672	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RI	FBtr0301460	4349	1119aa	FBpp0290675	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RJ	FBtr0301461	4276	1119aa	FBpp0290676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RB	FBtr0081524	4276	1119aa	FBpp0081052	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RM	FBtr0301464	4068	1119aa	FBpp0290679	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RG	FBtr0301458	3928	1119aa	FBpp0290673	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RA	FBtr0081525	3837	1119aa	FBpp0081053	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RL	FBtr0301463	3832	1119aa	FBpp0290678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RK	FBtr0301462	3830	1119aa	FBpp0290677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BKE4 Q9BKE5 Q9VID4	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Mondo-RE	FBtr0081527	3300	925aa	FBpp0081055	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAC9 Q8INT6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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